Check version of R:

sessionInfo()
R version 4.2.2 (2022-10-31)
Platform: x86_64-apple-darwin17.0 (64-bit)
Running under: macOS Monterey 12.6

Matrix products: default
LAPACK: /Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libRlapack.dylib

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] compiler_4.2.2  fastmap_1.1.0   cli_3.6.0       htmltools_0.5.4 tools_4.2.2    
 [6] yaml_2.3.7      rmarkdown_2.20  knitr_1.42      xfun_0.36       digest_0.6.31  
[11] rlang_1.0.6     evaluate_0.20  

Removing any current installation of RStan

remove.packages("rstan")
Removing package from ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
(as ‘lib’ is unspecified)
Error in remove.packages : there is no package called ‘rstan’
if (file.exists(".RData")) file.remove(".RData")
# Sys.setenv(DOWNLOAD_STATIC_LIBV8 = 1) # only necessary for Linux without the nodejs library / headers
install.packages("rstan", repos = "https://cloud.r-project.org/", dependencies = TRUE)
also installing the dependencies ‘colorspace’, ‘utf8’, ‘lazyeval’, ‘numDeriv’, ‘farver’, ‘labeling’, ‘munsell’, ‘RColorBrewer’, ‘viridisLite’, ‘fansi’, ‘pillar’, ‘pkgconfig’, ‘backports’, ‘ps’, ‘httpuv’, ‘fontawesome’, ‘sourcetools’, ‘later’, ‘promises’, ‘htmlwidgets’, ‘miniUI’, ‘crosstalk’, ‘zoo’, ‘plyr’, ‘igraph’, ‘generics’, ‘abind’, ‘tensorA’, ‘distributional’, ‘gtable’, ‘isoband’, ‘scales’, ‘tibble’, ‘withr’, ‘checkmate’, ‘matrixStats’, ‘callr’, ‘crayon’, ‘desc’, ‘prettyunits’, ‘processx’, ‘rprojroot’, ‘shiny’, ‘colourpicker’, ‘DT’, ‘dygraphs’, ‘gtools’, ‘reshape2’, ‘shinyjs’, ‘shinythemes’, ‘threejs’, ‘xtable’, ‘xts’, ‘dplyr’, ‘ggridges’, ‘posterior’, ‘tidyselect’, ‘curl’, ‘StanHeaders’, ‘ggplot2’, ‘inline’, ‘gridExtra’, ‘Rcpp’, ‘RcppParallel’, ‘loo’, ‘pkgbuild’, ‘RcppEigen’, ‘BH’, ‘RUnit’, ‘shinystan’, ‘bayesplot’, ‘rstantools’, ‘rstudioapi’, ‘V8’

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The downloaded binary packages are in
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* installing *source* package ‘fontawesome’ ...
** package ‘fontawesome’ successfully unpacked and MD5 sums checked
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (fontawesome)

The downloaded source packages are in
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Next I will check the installation to make sure its good. It turns out to be fine.

#library('rstan')
example(stan_model, package = "rstan", run.dontrun = TRUE)
Loading required package: StanHeaders
Loading required package: ggplot2
RStudio Community is a great place to get help:
https://community.rstudio.com/c/tidyverse
rstan (Version 2.21.8, GitRev: 2e1f913d3ca3)
For execution on a local, multicore CPU with excess RAM we recommend calling
options(mc.cores = parallel::detectCores()).
To avoid recompilation of unchanged Stan programs, we recommend calling
rstan_options(auto_write = TRUE)

stn_md> stancode <- 'data {real y_mean;} parameters {real y;} model {y ~ normal(y_mean,1);}'

stn_md> mod <- stan_model(model_code = stancode, verbose = TRUE)

TRANSLATING MODEL '16a540c6086086816528e4524def24d9' FROM Stan CODE TO C++ CODE NOW.
successful in parsing the Stan model '16a540c6086086816528e4524def24d9'.
COMPILING THE C++ CODE FOR MODEL '16a540c6086086816528e4524def24d9' NOW.
OS: x86_64, darwin17.0; rstan: 2.21.8; Rcpp: 1.0.10; inline: 0.3.19 
 >> setting environment variables: 
PKG_LIBS =  '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/lib//libStanServices.a' -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/lib/' -lStanHeaders -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/' -ltbb
PKG_CPPFLAGS =   -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include" -DEIGEN_NO_DEBUG  -DBOOST_DISABLE_ASSERTS  -DBOOST_PENDING_INTEGER_LOG2_HPP  -DSTAN_THREADS  -DBOOST_NO_AUTO_PTR  -include '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp'  -D_REENTRANT -DRCPP_PARALLEL_USE_TBB=1 
 >> Program source :

   1 : 
   2 : // includes from the plugin
   3 : // [[Rcpp::plugins(cpp14)]]
   4 : 
   5 : 
   6 : // user includes
   7 : #include <Rcpp.h>
   8 : #include <rstan/io/rlist_ref_var_context.hpp>
   9 : #include <rstan/io/r_ostream.hpp>
  10 : #include <rstan/stan_args.hpp>
  11 : #include <boost/integer/integer_log2.hpp>
  12 : // Code generated by Stan version 2.21.0
  13 : 
  14 : #include <stan/model/model_header.hpp>
  15 : 
  16 : namespace model26af63845289_16a540c6086086816528e4524def24d9_namespace {
  17 : 
  18 : using std::istream;
  19 : using std::string;
  20 : using std::stringstream;
  21 : using std::vector;
  22 : using stan::io::dump;
  23 : using stan::math::lgamma;
  24 : using stan::model::prob_grad;
  25 : using namespace stan::math;
  26 : 
  27 : static int current_statement_begin__;
  28 : 
  29 : stan::io::program_reader prog_reader__() {
  30 :     stan::io::program_reader reader;
  31 :     reader.add_event(0, 0, "start", "model26af63845289_16a540c6086086816528e4524def24d9");
  32 :     reader.add_event(3, 1, "end", "model26af63845289_16a540c6086086816528e4524def24d9");
  33 :     return reader;
  34 : }
  35 : 
  36 : class model26af63845289_16a540c6086086816528e4524def24d9
  37 :   : public stan::model::model_base_crtp<model26af63845289_16a540c6086086816528e4524def24d9> {
  38 : private:
  39 :         double y_mean;
  40 : public:
  41 :     model26af63845289_16a540c6086086816528e4524def24d9(rstan::io::rlist_ref_var_context& context__,
  42 :         std::ostream* pstream__ = 0)
  43 :         : model_base_crtp(0) {
  44 :         ctor_body(context__, 0, pstream__);
  45 :     }
  46 : 
  47 :     model26af63845289_16a540c6086086816528e4524def24d9(stan::io::var_context& context__,
  48 :         unsigned int random_seed__,
  49 :         std::ostream* pstream__ = 0)
  50 :         : model_base_crtp(0) {
  51 :         ctor_body(context__, random_seed__, pstream__);
  52 :     }
  53 : 
  54 :     void ctor_body(stan::io::var_context& context__,
  55 :                    unsigned int random_seed__,
  56 :                    std::ostream* pstream__) {
  57 :         typedef double local_scalar_t__;
  58 : 
  59 :         boost::ecuyer1988 base_rng__ =
  60 :           stan::services::util::create_rng(random_seed__, 0);
  61 :         (void) base_rng__;  // suppress unused var warning
  62 : 
  63 :         current_statement_begin__ = -1;
  64 : 
  65 :         static const char* function__ = "model26af63845289_16a540c6086086816528e4524def24d9_namespace::model26af63845289_16a540c6086086816528e4524def24d9";
  66 :         (void) function__;  // dummy to suppress unused var warning
  67 :         size_t pos__;
  68 :         (void) pos__;  // dummy to suppress unused var warning
  69 :         std::vector<int> vals_i__;
  70 :         std::vector<double> vals_r__;
  71 :         local_scalar_t__ DUMMY_VAR__(std::numeric_limits<double>::quiet_NaN());
  72 :         (void) DUMMY_VAR__;  // suppress unused var warning
  73 : 
  74 :         try {
  75 :             // initialize data block variables from context__
  76 :             current_statement_begin__ = 1;
  77 :             context__.validate_dims("data initialization", "y_mean", "double", context__.to_vec());
  78 :             y_mean = double(0);
  79 :             vals_r__ = context__.vals_r("y_mean");
  80 :             pos__ = 0;
  81 :             y_mean = vals_r__[pos__++];
  82 : 
  83 : 
  84 :             // initialize transformed data variables
  85 :             // execute transformed data statements
  86 : 
  87 :             // validate transformed data
  88 : 
  89 :             // validate, set parameter ranges
  90 :             num_params_r__ = 0U;
  91 :             param_ranges_i__.clear();
  92 :             current_statement_begin__ = 1;
  93 :             num_params_r__ += 1;
  94 :         } catch (const std::exception& e) {
  95 :             stan::lang::rethrow_located(e, current_statement_begin__, prog_reader__());
  96 :             // Next line prevents compiler griping about no return
  97 :             throw std::runtime_error("*** IF YOU SEE THIS, PLEASE REPORT A BUG ***");
  98 :         }
  99 :     }
 100 : 
 101 :     ~model26af63845289_16a540c6086086816528e4524def24d9() { }
 102 : 
 103 : 
 104 :     void transform_inits(const stan::io::var_context& context__,
 105 :                          std::vector<int>& params_i__,
 106 :                          std::vector<double>& params_r__,
 107 :                          std::ostream* pstream__) const {
 108 :         typedef double local_scalar_t__;
 109 :         stan::io::writer<double> writer__(params_r__, params_i__);
 110 :         size_t pos__;
 111 :         (void) pos__; // dummy call to supress warning
 112 :         std::vector<double> vals_r__;
 113 :         std::vector<int> vals_i__;
 114 : 
 115 :         current_statement_begin__ = 1;
 116 :         if (!(context__.contains_r("y")))
 117 :             stan::lang::rethrow_located(std::runtime_error(std::string("Variable y missing")), current_statement_begin__, prog_reader__());
 118 :         vals_r__ = context__.vals_r("y");
 119 :         pos__ = 0U;
 120 :         context__.validate_dims("parameter initialization", "y", "double", context__.to_vec());
 121 :         double y(0);
 122 :         y = vals_r__[pos__++];
 123 :         try {
 124 :             writer__.scalar_unconstrain(y);
 125 :         } catch (const std::exception& e) {
 126 :             stan::lang::rethrow_located(std::runtime_error(std::string("Error transforming variable y: ") + e.what()), current_statement_begin__, prog_reader__());
 127 :         }
 128 : 
 129 :         params_r__ = writer__.data_r();
 130 :         params_i__ = writer__.data_i();
 131 :     }
 132 : 
 133 :     void transform_inits(const stan::io::var_context& context,
 134 :                          Eigen::Matrix<double, Eigen::Dynamic, 1>& params_r,
 135 :                          std::ostream* pstream__) const {
 136 :       std::vector<double> params_r_vec;
 137 :       std::vector<int> params_i_vec;
 138 :       transform_inits(context, params_i_vec, params_r_vec, pstream__);
 139 :       params_r.resize(params_r_vec.size());
 140 :       for (int i = 0; i < params_r.size(); ++i)
 141 :         params_r(i) = params_r_vec[i];
 142 :     }
 143 : 
 144 : 
 145 :     template <bool propto__, bool jacobian__, typename T__>
 146 :     T__ log_prob(std::vector<T__>& params_r__,
 147 :                  std::vector<int>& params_i__,
 148 :                  std::ostream* pstream__ = 0) const {
 149 : 
 150 :         typedef T__ local_scalar_t__;
 151 : 
 152 :         local_scalar_t__ DUMMY_VAR__(std::numeric_limits<double>::quiet_NaN());
 153 :         (void) DUMMY_VAR__;  // dummy to suppress unused var warning
 154 : 
 155 :         T__ lp__(0.0);
 156 :         stan::math::accumulator<T__> lp_accum__;
 157 :         try {
 158 :             stan::io::reader<local_scalar_t__> in__(params_r__, params_i__);
 159 : 
 160 :             // model parameters
 161 :             current_statement_begin__ = 1;
 162 :             local_scalar_t__ y;
 163 :             (void) y;  // dummy to suppress unused var warning
 164 :             if (jacobian__)
 165 :                 y = in__.scalar_constrain(lp__);
 166 :             else
 167 :                 y = in__.scalar_constrain();
 168 : 
 169 :             // model body
 170 : 
 171 :             current_statement_begin__ = 1;
 172 :             lp_accum__.add(normal_log<propto__>(y, y_mean, 1));
 173 : 
 174 :         } catch (const std::exception& e) {
 175 :             stan::lang::rethrow_located(e, current_statement_begin__, prog_reader__());
 176 :             // Next line prevents compiler griping about no return
 177 :             throw std::runtime_error("*** IF YOU SEE THIS, PLEASE REPORT A BUG ***");
 178 :         }
 179 : 
 180 :         lp_accum__.add(lp__);
 181 :         return lp_accum__.sum();
 182 : 
 183 :     } // log_prob()
 184 : 
 185 :     template <bool propto, bool jacobian, typename T_>
 186 :     T_ log_prob(Eigen::Matrix<T_,Eigen::Dynamic,1>& params_r,
 187 :                std::ostream* pstream = 0) const {
 188 :       std::vector<T_> vec_params_r;
 189 :       vec_params_r.reserve(params_r.size());
 190 :       for (int i = 0; i < params_r.size(); ++i)
 191 :         vec_params_r.push_back(params_r(i));
 192 :       std::vector<int> vec_params_i;
 193 :       return log_prob<propto,jacobian,T_>(vec_params_r, vec_params_i, pstream);
 194 :     }
 195 : 
 196 : 
 197 :     void get_param_names(std::vector<std::string>& names__) const {
 198 :         names__.resize(0);
 199 :         names__.push_back("y");
 200 :     }
 201 : 
 202 : 
 203 :     void get_dims(std::vector<std::vector<size_t> >& dimss__) const {
 204 :         dimss__.resize(0);
 205 :         std::vector<size_t> dims__;
 206 :         dims__.resize(0);
 207 :         dimss__.push_back(dims__);
 208 :     }
 209 : 
 210 :     template <typename RNG>
 211 :     void write_array(RNG& base_rng__,
 212 :                      std::vector<double>& params_r__,
 213 :                      std::vector<int>& params_i__,
 214 :                      std::vector<double>& vars__,
 215 :                      bool include_tparams__ = true,
 216 :                      bool include_gqs__ = true,
 217 :                      std::ostream* pstream__ = 0) const {
 218 :         typedef double local_scalar_t__;
 219 : 
 220 :         vars__.resize(0);
 221 :         stan::io::reader<local_scalar_t__> in__(params_r__, params_i__);
 222 :         static const char* function__ = "model26af63845289_16a540c6086086816528e4524def24d9_namespace::write_array";
 223 :         (void) function__;  // dummy to suppress unused var warning
 224 : 
 225 :         // read-transform, write parameters
 226 :         double y = in__.scalar_constrain();
 227 :         vars__.push_back(y);
 228 : 
 229 :         double lp__ = 0.0;
 230 :         (void) lp__;  // dummy to suppress unused var warning
 231 :         stan::math::accumulator<double> lp_accum__;
 232 : 
 233 :         local_scalar_t__ DUMMY_VAR__(std::numeric_limits<double>::quiet_NaN());
 234 :         (void) DUMMY_VAR__;  // suppress unused var warning
 235 : 
 236 :         if (!include_tparams__ && !include_gqs__) return;
 237 : 
 238 :         try {
 239 :             if (!include_gqs__ && !include_tparams__) return;
 240 :             if (!include_gqs__) return;
 241 :         } catch (const std::exception& e) {
 242 :             stan::lang::rethrow_located(e, current_statement_begin__, prog_reader__());
 243 :             // Next line prevents compiler griping about no return
 244 :             throw std::runtime_error("*** IF YOU SEE THIS, PLEASE REPORT A BUG ***");
 245 :         }
 246 :     }
 247 : 
 248 :     template <typename RNG>
 249 :     void write_array(RNG& base_rng,
 250 :                      Eigen::Matrix<double,Eigen::Dynamic,1>& params_r,
 251 :                      Eigen::Matrix<double,Eigen::Dynamic,1>& vars,
 252 :                      bool include_tparams = true,
 253 :                      bool include_gqs = true,
 254 :                      std::ostream* pstream = 0) const {
 255 :       std::vector<double> params_r_vec(params_r.size());
 256 :       for (int i = 0; i < params_r.size(); ++i)
 257 :         params_r_vec[i] = params_r(i);
 258 :       std::vector<double> vars_vec;
 259 :       std::vector<int> params_i_vec;
 260 :       write_array(base_rng, params_r_vec, params_i_vec, vars_vec, include_tparams, include_gqs, pstream);
 261 :       vars.resize(vars_vec.size());
 262 :       for (int i = 0; i < vars.size(); ++i)
 263 :         vars(i) = vars_vec[i];
 264 :     }
 265 : 
 266 :     std::string model_name() const {
 267 :         return "model26af63845289_16a540c6086086816528e4524def24d9";
 268 :     }
 269 : 
 270 : 
 271 :     void constrained_param_names(std::vector<std::string>& param_names__,
 272 :                                  bool include_tparams__ = true,
 273 :                                  bool include_gqs__ = true) const {
 274 :         std::stringstream param_name_stream__;
 275 :         param_name_stream__.str(std::string());
 276 :         param_name_stream__ << "y";
 277 :         param_names__.push_back(param_name_stream__.str());
 278 : 
 279 :         if (!include_gqs__ && !include_tparams__) return;
 280 : 
 281 :         if (include_tparams__) {
 282 :         }
 283 : 
 284 :         if (!include_gqs__) return;
 285 :     }
 286 : 
 287 : 
 288 :     void unconstrained_param_names(std::vector<std::string>& param_names__,
 289 :                                    bool include_tparams__ = true,
 290 :                                    bool include_gqs__ = true) const {
 291 :         std::stringstream param_name_stream__;
 292 :         param_name_stream__.str(std::string());
 293 :         param_name_stream__ << "y";
 294 :         param_names__.push_back(param_name_stream__.str());
 295 : 
 296 :         if (!include_gqs__ && !include_tparams__) return;
 297 : 
 298 :         if (include_tparams__) {
 299 :         }
 300 : 
 301 :         if (!include_gqs__) return;
 302 :     }
 303 : 
 304 : }; // model
 305 : 
 306 : }  // namespace
 307 : 
 308 : typedef model26af63845289_16a540c6086086816528e4524def24d9_namespace::model26af63845289_16a540c6086086816528e4524def24d9 stan_model;
 309 : 
 310 : #ifndef USING_R
 311 : 
 312 : stan::model::model_base& new_model(
 313 :         stan::io::var_context& data_context,
 314 :         unsigned int seed,
 315 :         std::ostream* msg_stream) {
 316 :   stan_model* m = new stan_model(data_context, seed, msg_stream);
 317 :   return *m;
 318 : }
 319 : 
 320 : #endif
 321 : 
 322 : 
 323 : 
 324 : #include <rstan_next/stan_fit.hpp>
 325 : 
 326 : struct stan_model_holder {
 327 :     stan_model_holder(rstan::io::rlist_ref_var_context rcontext,
 328 :                       unsigned int random_seed)
 329 :     : rcontext_(rcontext), random_seed_(random_seed)
 330 :      {
 331 :      }
 332 : 
 333 :    //stan::math::ChainableStack ad_stack;
 334 :    rstan::io::rlist_ref_var_context rcontext_;
 335 :    unsigned int random_seed_;
 336 : };
 337 : 
 338 : Rcpp::XPtr<stan::model::model_base> model_ptr(stan_model_holder* smh) {
 339 :   Rcpp::XPtr<stan::model::model_base> model_instance(new stan_model(smh->rcontext_, smh->random_seed_), true);
 340 :   return model_instance;
 341 : }
 342 : 
 343 : Rcpp::XPtr<rstan::stan_fit_base> fit_ptr(stan_model_holder* smh) {
 344 :   return Rcpp::XPtr<rstan::stan_fit_base>(new rstan::stan_fit(model_ptr(smh), smh->random_seed_), true);
 345 : }
 346 : 
 347 : std::string model_name(stan_model_holder* smh) {
 348 :   return model_ptr(smh).get()->model_name();
 349 : }
 350 : 
 351 : RCPP_MODULE(stan_fit4model26af63845289_16a540c6086086816528e4524def24d9_mod){
 352 :   Rcpp::class_<stan_model_holder>("stan_fit4model26af63845289_16a540c6086086816528e4524def24d9")
 353 :   .constructor<rstan::io::rlist_ref_var_context, unsigned int>()
 354 :   .method("model_ptr", &model_ptr)
 355 :   .method("fit_ptr", &fit_ptr)
 356 :   .method("model_name", &model_name)
 357 :   ;
 358 : }
 359 : 
 360 : 
 361 : // declarations
 362 : extern "C" {
 363 : SEXP file26af6ea96b62( ) ;
 364 : }
 365 : 
 366 : // definition
 367 : SEXP file26af6ea96b62() {
 368 :  return Rcpp::wrap("16a540c6086086816528e4524def24d9");
 369 : }
make cmd is
  make -f '/Library/Frameworks/R.framework/Resources/etc/Makeconf' -f '/Library/Frameworks/R.framework/Resources/share/make/shlib.mk' CXX='$(CXX14) $(CXX14STD)' CXXFLAGS='$(CXX14FLAGS)' CXXPICFLAGS='$(CXX14PICFLAGS)' SHLIB_LDFLAGS='$(SHLIB_CXX14LDFLAGS)' SHLIB_LD='$(SHLIB_CXX14LD)' SHLIB='file26af6ea96b62.so' OBJECTS='file26af6ea96b62.o'

make would use
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppEigen/include/unsupported"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/src/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/include/"  -I"/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/include" -DEIGEN_NO_DEBUG  -DBOOST_DISABLE_ASSERTS  -DBOOST_PENDING_INTEGER_LOG2_HPP  -DSTAN_THREADS  -DBOOST_NO_AUTO_PTR  -include '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/include/stan/math/prim/mat/fun/Eigen.hpp'  -D_REENTRANT -DRCPP_PARALLEL_USE_TBB=1   -I/usr/local/include   -fPIC  -Wall -g -O2  -c file26af6ea96b62.cpp -o file26af6ea96b62.o
if test  "zfile26af6ea96b62.o" != "z"; then \
      echo clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"/Library/Frameworks/R.framework/Resources/lib" -L/usr/local/lib -o file26af6ea96b62.so file26af6ea96b62.o  '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/lib//libStanServices.a' -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/lib/' -lStanHeaders -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/' -ltbb  -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation; \
      clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L"/Library/Frameworks/R.framework/Resources/lib" -L/usr/local/lib -o file26af6ea96b62.so file26af6ea96b62.o  '/Library/Frameworks/R.framework/Versions/4.2/Resources/library/rstan/lib//libStanServices.a' -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/StanHeaders/lib/' -lStanHeaders -L'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/RcppParallel/lib/' -ltbb  -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation; \
    fi

stn_md> fit <- sampling(mod, data = list(y_mean = 0))

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 1.8e-05 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.18 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
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Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 0.020146 seconds (Warm-up)
Chain 1:                0.020211 seconds (Sampling)
Chain 1:                0.040357 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 9e-06 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.09 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
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Chain 2: Iteration: 1200 / 2000 [ 60%]  (Sampling)
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Chain 2: Iteration: 1800 / 2000 [ 90%]  (Sampling)
Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 0.021086 seconds (Warm-up)
Chain 2:                0.017621 seconds (Sampling)
Chain 2:                0.038707 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 9e-06 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.09 seconds.
Chain 3: Adjust your expectations accordingly!
Chain 3: 
Chain 3: 
Chain 3: Iteration:    1 / 2000 [  0%]  (Warmup)
Chain 3: Iteration:  200 / 2000 [ 10%]  (Warmup)
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Chain 3: Iteration: 1800 / 2000 [ 90%]  (Sampling)
Chain 3: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 3: 
Chain 3:  Elapsed Time: 0.023116 seconds (Warm-up)
Chain 3:                0.018033 seconds (Sampling)
Chain 3:                0.041149 seconds (Total)
Chain 3: 

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 4).
Chain 4: 
Chain 4: Gradient evaluation took 8e-06 seconds
Chain 4: 1000 transitions using 10 leapfrog steps per transition would take 0.08 seconds.
Chain 4: Adjust your expectations accordingly!
Chain 4: 
Chain 4: 
Chain 4: Iteration:    1 / 2000 [  0%]  (Warmup)
Chain 4: Iteration:  200 / 2000 [ 10%]  (Warmup)
Chain 4: Iteration:  400 / 2000 [ 20%]  (Warmup)
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Chain 4: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 4: 
Chain 4:  Elapsed Time: 0.022877 seconds (Warm-up)
Chain 4:                0.019182 seconds (Sampling)
Chain 4:                0.042059 seconds (Total)
Chain 4: 

stn_md> fit2 <- sampling(mod, data = list(y_mean = 5))

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 1).
Chain 1: 
Chain 1: Gradient evaluation took 9e-06 seconds
Chain 1: 1000 transitions using 10 leapfrog steps per transition would take 0.09 seconds.
Chain 1: Adjust your expectations accordingly!
Chain 1: 
Chain 1: 
Chain 1: Iteration:    1 / 2000 [  0%]  (Warmup)
Chain 1: Iteration:  200 / 2000 [ 10%]  (Warmup)
Chain 1: Iteration:  400 / 2000 [ 20%]  (Warmup)
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Chain 1: Iteration: 1001 / 2000 [ 50%]  (Sampling)
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Chain 1: Iteration: 1800 / 2000 [ 90%]  (Sampling)
Chain 1: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 1: 
Chain 1:  Elapsed Time: 0.018732 seconds (Warm-up)
Chain 1:                0.016824 seconds (Sampling)
Chain 1:                0.035556 seconds (Total)
Chain 1: 

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 2).
Chain 2: 
Chain 2: Gradient evaluation took 8e-06 seconds
Chain 2: 1000 transitions using 10 leapfrog steps per transition would take 0.08 seconds.
Chain 2: Adjust your expectations accordingly!
Chain 2: 
Chain 2: 
Chain 2: Iteration:    1 / 2000 [  0%]  (Warmup)
Chain 2: Iteration:  200 / 2000 [ 10%]  (Warmup)
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Chain 2: Iteration: 2000 / 2000 [100%]  (Sampling)
Chain 2: 
Chain 2:  Elapsed Time: 0.021559 seconds (Warm-up)
Chain 2:                0.01866 seconds (Sampling)
Chain 2:                0.040219 seconds (Total)
Chain 2: 

SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 3).
Chain 3: 
Chain 3: Gradient evaluation took 7e-06 seconds
Chain 3: 1000 transitions using 10 leapfrog steps per transition would take 0.07 seconds.
Chain 3: Adjust your expectations accordingly!
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SAMPLING FOR MODEL '16a540c6086086816528e4524def24d9' NOW (CHAIN 4).
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Chain 4: 
  1. Install cmdstanr
# we recommend running this is a fresh R session or restarting your current session
install.packages("cmdstanr", repos = c("https://mc-stan.org/r-packages/", getOption("repos")))
also installing the dependency ‘data.table’

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/data.table_1.14.6.tgz'
Content type 'application/x-gzip' length 2329531 bytes (2.2 MB)
==================================================
downloaded 2.2 MB

trying URL 'https://mc-stan.org/r-packages/bin/macosx/contrib/4.2/cmdstanr_0.5.3.tgz'
Content type 'application/octet-stream' length 1124035 bytes (1.1 MB)
==================================================
downloaded 1.1 MB

The downloaded binary packages are in
    /var/folders/98/_dskclzx4ysgs770t3f24qbw0000gn/T//Rtmpi3512p/downloaded_packages

Checking the installation.

library(cmdstanr)
This is cmdstanr version 0.5.3
- CmdStanR documentation and vignettes: mc-stan.org/cmdstanr
- CmdStan path: /Users/brianbeckage/.cmdstan/cmdstan-2.28.2
- CmdStan version: 2.28.2

A newer version of CmdStan is available. See ?install_cmdstan() to install it.
To disable this check set option or environment variable CMDSTANR_NO_VER_CHECK=TRUE.
check_cmdstan_toolchain(fix = TRUE, quiet = TRUE)
library(posterior)
This is posterior version 1.3.1

Attaching package: ‘posterior’

The following objects are masked from ‘package:stats’:

    mad, sd, var
library(bayesplot)
This is bayesplot version 1.10.0
- Online documentation and vignettes at mc-stan.org/bayesplot
- bayesplot theme set to bayesplot::theme_default()
   * Does _not_ affect other ggplot2 plots
   * See ?bayesplot_theme_set for details on theme setting

Attaching package: ‘bayesplot’

The following object is masked from ‘package:posterior’:

    rhat
color_scheme_set("brightblue")

Message above indicated that I need to update my installation of CmdStan: ‘A newer version of CmdStan is available. See ?install_cmdstan() to install it.’

First checkibg to see if C tools are properly set up

check_cmdstan_toolchain()
The C++ toolchain required for CmdStan is setup properly!

Next, installing CmdStan

install_cmdstan(cores = 2)
The C++ toolchain required for CmdStan is setup properly!
* Latest CmdStan release is v2.31.0
* Installing CmdStan v2.31.0 in /Users/brianbeckage/.cmdstan/cmdstan-2.31.0
* Downloading cmdstan-2.31.0.tar.gz from GitHub...
* Download complete
* Unpacking archive...
* Building CmdStan binaries...
cp bin/mac-stanc bin/stanc
chmod +x bin/stanc
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/nvector/serial/nvector_serial.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/nvector/serial/nvector_serial.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea_io.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea_io.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bandpre.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bandpre.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bbdpre.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bbdpre.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_diag.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_diag.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_direct.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_direct.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_io.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_io.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_ls.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_ls.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_sim.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_sim.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg1.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg1.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_spils.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_spils.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_band.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_band.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_context.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_context.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_dense.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_dense.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_direct.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_direct.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_futils.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_futils.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_iterative.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_iterative.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_linearsolver.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_linearsolver.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_matrix.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_matrix.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_memory.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_memory.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nonlinearsolver.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nonlinearsolver.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector_senswrapper.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector_senswrapper.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_version.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_version.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/band/sunmatrix_band.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/band/sunmatrix_band.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/dense/sunmatrix_dense.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/dense/sunmatrix_dense.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/band/sunlinsol_band.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/band/sunlinsol_band.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/dense/sunlinsol_dense.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/dense/sunlinsol_dense.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/newton/sunnonlinsol_newton.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa_io.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa_io.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_bbdpre.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_bbdpre.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_direct.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_direct.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ic.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ic.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_io.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_io.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ls.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ls.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_sim.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_sim.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_stg.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_stg.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_spils.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_spils.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_bbdpre.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_bbdpre.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_direct.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_direct.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_io.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_io.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_ls.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_ls.o
clang++ -pipe   -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT  -O3 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials -DNO_FPRINTF_OUTPUT     -O3  -c -x c -include stan/lib/stan_math/lib/sundials_6.1.1/include/stan_sundials_printf_override.hpp stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_spils.c -o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_spils.o
touch stan/lib/stan_math/lib/tbb/tbb-make-check

--- Compiling the main object file. This might take up to a minute. ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -o src/cmdstan/main.o src/cmdstan/main.cpp

--- Compiling pre-compiled header. This might take a few seconds. ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c stan/src/stan/model/model_header.hpp -o stan/src/stan/model/model_header.hpp.gch
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:4:
In file included from src/cmdstan/arguments/arg_data.hpp:4:
In file included from src/cmdstan/arguments/categorical_argument.hpp:4:
In file included from src/cmdstan/arguments/argument.hpp:4:
In file included from stan/src/stan/callbacks/writer.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:31:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/bad_lexical_cast.hpp:28:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:75:14: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
        std::sprintf( buffer, ":%ld", static_cast<long>( line() ) );
             ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:4:
In file included from src/cmdstan/arguments/arg_data.hpp:4:
In file included from src/cmdstan/arguments/categorical_argument.hpp:4:
In file included from src/cmdstan/arguments/argument.hpp:4:
In file included from stan/src/stan/callbacks/writer.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:31:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/bad_lexical_cast.hpp:28:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:80:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf( buffer, ":%ld", static_cast<long>( column() ) );
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:4:
In file included from src/cmdstan/arguments/arg_data.hpp:4:
In file included from src/cmdstan/arguments/categorical_argument.hpp:4:
In file included from src/cmdstan/arguments/argument.hpp:4:
In file included from stan/src/stan/callbacks/writer.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:285:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:4:
In file included from src/cmdstan/arguments/arg_data.hpp:4:
In file included from src/cmdstan/arguments/categorical_argument.hpp:4:
In file included from src/cmdstan/arguments/argument.hpp:4:
In file included from stan/src/stan/callbacks/writer.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:297:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:4:
In file included from src/cmdstan/arguments/arg_data.hpp:4:
In file included from src/cmdstan/arguments/categorical_argument.hpp:4:
In file included from src/cmdstan/arguments/argument.hpp:4:
In file included from stan/src/stan/callbacks/writer.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:310:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:8:
In file included from stan/lib/stan_math/stan/math/rev/core.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/core/chainable_object.hpp:6:
In file included from stan/lib/stan_math/stan/math/rev/core/typedefs.hpp:7:
In file included from stan/lib/stan_math/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:31:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/bad_lexical_cast.hpp:28:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:75:14: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
        std::sprintf( buffer, ":%ld", static_cast<long>( line() ) );
             ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:8:
In file included from stan/lib/stan_math/stan/math/rev/core.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/core/chainable_object.hpp:6:
In file included from stan/lib/stan_math/stan/math/rev/core/typedefs.hpp:7:
In file included from stan/lib/stan_math/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:31:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/bad_lexical_cast.hpp:28:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:80:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf( buffer, ":%ld", static_cast<long>( column() ) );
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:8:
In file included from stan/lib/stan_math/stan/math/rev/core.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/core/chainable_object.hpp:6:
In file included from stan/lib/stan_math/stan/math/rev/core/typedefs.hpp:7:
In file included from stan/lib/stan_math/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:285:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:8:
In file included from stan/lib/stan_math/stan/math/rev/core.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/core/chainable_object.hpp:6:
In file included from stan/lib/stan_math/stan/math/rev/core/typedefs.hpp:7:
In file included from stan/lib/stan_math/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:297:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:8:
In file included from stan/lib/stan_math/stan/math/rev/core.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/core/chainable_object.hpp:6:
In file included from stan/lib/stan_math/stan/math/rev/core/typedefs.hpp:7:
In file included from stan/lib/stan_math/stan/math/rev/core/Eigen_NumTraits.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:310:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:29:
In file included from stan/src/stan/io/dump.hpp:7:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:72:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d).", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/main.cpp:1:
In file included from src/cmdstan/command.hpp:29:
In file included from stan/src/stan/io/dump.hpp:7:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:104:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d). A new step size was not found.", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/fun.hpp:198:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:72:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d).", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from stan/src/stan/model/model_header.hpp:4:
In file included from stan/lib/stan_math/stan/math.hpp:19:
In file included from stan/lib/stan_math/stan/math/rev.hpp:10:
In file included from stan/lib/stan_math/stan/math/rev/fun.hpp:198:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:104:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d). A new step size was not found.", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
7 warnings generated.
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -fvisibility=hidden -o bin/cmdstan/stansummary.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   src/cmdstan/stansummary.cpp
clang: warning: -Wl,-L,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
clang: warning: -Wl,-rpath,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:75:14: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
        std::sprintf( buffer, ":%ld", static_cast<long>( line() ) );
             ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:80:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf( buffer, ":%ld", static_cast<long>( column() ) );
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:285:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:297:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:310:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:72:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d).", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/stansummary.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:104:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d). A new step size was not found.", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
7 warnings generated.
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -fvisibility=hidden -o bin/cmdstan/print.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   src/cmdstan/print.cpp
clang: warning: -Wl,-L,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
clang: warning: -Wl,-rpath,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:75:14: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
        std::sprintf( buffer, ":%ld", static_cast<long>( line() ) );
             ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:80:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf( buffer, ":%ld", static_cast<long>( column() ) );
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
7 warnings generated.
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -fvisibility=hidden -o bin/cmdstan/diagnose.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   src/cmdstan/diagnose.cpp
clang: warning: -Wl,-L,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
clang: warning: -Wl,-rpath,/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb: 'linker' input unused [-Wunused-command-line-argument]
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:285:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:297:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:310:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:75:14: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
        std::sprintf( buffer, ":%ld", static_cast<long>( line() ) );
             ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:4:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string.hpp:23:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/split.hpp:16:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/iter_find.hpp:27:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/find_iterator.hpp:24:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/algorithm/string/detail/find_iterator.hpp:18:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function.hpp:30:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/function/detail/prologue.hpp:15:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/throw_exception.hpp:24:
stan/lib/stan_math/lib/boost_1.78.0/boost/assert/source_location.hpp:80:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf( buffer, ":%ld", static_cast<long>( column() ) );
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:285:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:297:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:10:
In file included from stan/lib/stan_math/stan/math/prim/core.hpp:4:
In file included from stan/lib/stan_math/stan/math/prim/core/init_threadpool_tbb.hpp:6:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast.hpp:32:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/try_lexical_convert.hpp:44:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical.hpp:54:
stan/lib/stan_math/lib/boost_1.78.0/boost/lexical_cast/detail/converter_lexical_streams.hpp:310:21: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
                    sprintf(begin,
                    ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:72:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d).", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/print.cpp:2:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:104:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d). A new step size was not found.", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:72:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d).", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
In file included from src/cmdstan/diagnose.cpp:1:
In file included from src/cmdstan/stansummary_helper.hpp:4:
In file included from stan/src/stan/mcmc/chains.hpp:4:
In file included from stan/src/stan/io/stan_csv_reader.hpp:5:
In file included from stan/lib/stan_math/stan/math/prim.hpp:15:
In file included from stan/lib/stan_math/stan/math/prim/functor.hpp:14:
In file included from stan/lib/stan_math/stan/math/prim/functor/integrate_ode_rk45.hpp:6:
In file included from stan/lib/stan_math/stan/math/prim/functor/ode_rk45.hpp:9:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint.hpp:37:
In file included from stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/stepper/dense_output_runge_kutta.hpp:40:
stan/lib/stan_math/lib/boost_1.78.0/boost/numeric/odeint/integrate/max_step_checker.hpp:104:18: warning: 'sprintf' is deprecated: This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead. [-Wdeprecated-declarations]
            std::sprintf(error_msg, "Max number of iterations exceeded (%d). A new step size was not found.", m_max_steps);
                 ^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/stdio.h:188:1: note: 'sprintf' has been explicitly marked deprecated here
__deprecated_msg("This function is provided for compatibility reasons only.  Due to security concerns inherent in the design of sprintf(3), it is highly recommended that you use snprintf(3) instead.")
^
/Applications/Xcode.app/Contents/Developer/Platforms/MacOSX.platform/Developer/SDKs/MacOSX.sdk/usr/include/sys/cdefs.h:215:48: note: expanded from macro '__deprecated_msg'
        #define __deprecated_msg(_msg) __attribute__((__deprecated__(_msg)))
                                                      ^
7 warnings generated.
ar -rs stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/src/nvector/serial/nvector_serial.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.o
7 warnings generated.
ar -rs stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodea_io.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bandpre.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_bbdpre.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_diag.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_io.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_ls.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_sim.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_nls_stg1.o stan/lib/stan_math/lib/sundials_6.1.1/src/cvodes/cvodes_spils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_context.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
ar: creating archive stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a
ar -rs stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idaa_io.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_bbdpre.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ic.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_io.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_ls.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_sim.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_nls_stg.o stan/lib/stan_math/lib/sundials_6.1.1/src/idas/idas_spils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_context.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
ar: creating archive stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a
ar -rs stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol.o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_bbdpre.o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_io.o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_ls.o stan/lib/stan_math/lib/sundials_6.1.1/src/kinsol/kinsol_spils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_context.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_direct.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_futils.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_iterative.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_linearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_math.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_matrix.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_memory.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nonlinearsolver.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_nvector_senswrapper.o stan/lib/stan_math/lib/sundials_6.1.1/src/sundials/sundials_version.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/band/sunmatrix_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunmatrix/dense/sunmatrix_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/band/sunlinsol_band.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunlinsol/dense/sunlinsol_dense.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/newton/sunnonlinsol_newton.o stan/lib/stan_math/lib/sundials_6.1.1/src/sunnonlinsol/fixedpoint/sunnonlinsol_fixedpoint.o
ar: creating archive stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a
tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"  ' 'make' -C "stan/lib/stan_math/lib/tbb" -r -f "/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbbmalloc" compiler=clang cfg=release stdver=c++1y malloc CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backend.cpp
ar: creating archive stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/large_objects.cpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/stansummary.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   -o bin/stansummary
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/backref.cpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/print.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   -o bin/print
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"      bin/cmdstan/diagnose.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   -o bin/diagnose
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbbmalloc.cpp
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -o itt_notify_malloc.o -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
sh ../tbb_2020.3/build/version_info_macos.sh clang++ -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -std=c++1y -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include >version_string.ver
clang++ -E -x c++ ../tbb_2020.3/src/tbbmalloc/mac64-tbbmalloc-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1  -Wno-non-virtual-dtor -Wno-dangling-else -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbbmalloc.def
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/proxy.cpp
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -Wall -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1  -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -D__TBBMALLOC_BUILD=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc ../tbb_2020.3/src/tbbmalloc/tbb_function_replacement.cpp
clang++ -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11   -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -fno-rtti -fno-exceptions -D__TBBMALLOC_BUILD=1 -Wno-non-virtual-dtor -Wno-dangling-else -fPIC  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I../tbb_2020.3/src/tbbmalloc -I../tbb_2020.3/src/tbbmalloc -I. ../tbb_2020.3/src/tbbmalloc/frontend.cpp
clang -fPIC -o libtbbmalloc.dylib backend.o large_objects.o backref.o  tbbmalloc.o  itt_notify_malloc.o frontend.o  -ldl -lpthread -dynamiclib -install_name @rpath/libtbbmalloc.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbbmalloc.def
clang++ -fPIC -o libtbbmalloc_proxy.dylib proxy.o tbb_function_replacement.o  -ldl -lpthread libtbbmalloc.dylib -dynamiclib -install_name @rpath/libtbbmalloc_proxy.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"  
touch stan/lib/stan_math/lib/tbb/version_tbb_2020.3
tbb_root="../tbb_2020.3" CXX="clang++" CC="clang" LDFLAGS='-Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"  ' 'make' -C "stan/lib/stan_math/lib/tbb" -r -f "/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb" compiler=clang cfg=release stdver=c++1y  CXXFLAGS="-Wno-unknown-warning-option -Wno-deprecated-copy  "
/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb_2020.3/build/Makefile.tbb:28: CONFIG: cfg=release arch=intel64 compiler=clang target=macos runtime=cc14.0.0_os12.6
clang++ -o concurrent_hash_map.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_hash_map.cpp
clang++ -o concurrent_queue.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_queue.cpp
clang++ -o concurrent_vector.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_vector.cpp
clang++ -o dynamic_link.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/dynamic_link.cpp
clang++ -o itt_notify.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/itt_notify.cpp
clang++ -o cache_aligned_allocator.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/cache_aligned_allocator.cpp
clang++ -o pipeline.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/pipeline.cpp
clang++ -o queuing_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_mutex.cpp
clang++ -o queuing_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/queuing_rw_mutex.cpp
clang++ -o reader_writer_lock.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/reader_writer_lock.cpp
clang++ -o spin_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_rw_mutex.cpp
clang++ -o x86_rtm_rw_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/x86_rtm_rw_mutex.cpp
clang++ -o spin_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/spin_mutex.cpp
clang++ -o critical_section.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/critical_section.cpp
clang++ -o mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/mutex.cpp
clang++ -o recursive_mutex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/recursive_mutex.cpp
clang++ -o condition_variable.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/condition_variable.cpp
clang++ -o tbb_thread.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_thread.cpp
clang++ -o concurrent_monitor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/concurrent_monitor.cpp
clang++ -o semaphore.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/semaphore.cpp
clang++ -o private_server.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/private_server.cpp
clang++ -o rml_tbb.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/rml/client/rml_tbb.cpp
clang++ -o tbb_misc.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include -I. ../tbb_2020.3/src/tbb/tbb_misc.cpp
clang++ -o tbb_misc_ex.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_misc_ex.cpp
clang++ -o task.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task.cpp
clang++ -o task_group_context.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/task_group_context.cpp
clang++ -o governor.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/governor.cpp
clang++ -o market.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/market.cpp
clang++ -o arena.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/arena.cpp
clang++ -o scheduler.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/scheduler.cpp
../tbb_2020.3/src/tbb/arena.cpp:308:14: warning: variable 'drained' set but not used [-Wunused-but-set-variable]
    intptr_t drained = 0;
             ^
1 warning generated.
clang++ -o observer_proxy.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/observer_proxy.cpp
clang++ -o tbb_statistics.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_statistics.cpp
clang++ -o tbb_main.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/tbb/tbb_main.cpp
clang++ -o concurrent_vector_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_vector_v2.cpp
clang++ -o concurrent_queue_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/concurrent_queue_v2.cpp
clang++ -o spin_rw_mutex_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/spin_rw_mutex_v2.cpp
clang++ -o task_v2.o -c -MMD -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -std=c++1y  -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include ../tbb_2020.3/src/old/task_v2.cpp
sh ../tbb_2020.3/build/generate_tbbvars.sh DY
clang++ -E -x c++ ../tbb_2020.3/src/tbb/mac64-tbb-export.def -O2 -DUSE_PTHREAD -DDO_ITT_NOTIFY -stdlib=libc++ -m64 -mrtm -mmacosx-version-min=10.11  -fPIC  -D__TBB_BUILD=1 -Wall -Wno-non-virtual-dtor -Wno-dangling-else -Wno-unknown-warning-option -Wno-deprecated-copy   -DTBB_SUPPRESS_DEPRECATED_MESSAGES=1 -I../tbb_2020.3/src -I../tbb_2020.3/src/rml/include -I../tbb_2020.3/include > tbb.def
clang++ -fPIC -o libtbb.dylib concurrent_hash_map.o concurrent_queue.o concurrent_vector.o dynamic_link.o itt_notify.o cache_aligned_allocator.o pipeline.o queuing_mutex.o queuing_rw_mutex.o reader_writer_lock.o spin_rw_mutex.o x86_rtm_rw_mutex.o spin_mutex.o critical_section.o mutex.o recursive_mutex.o condition_variable.o tbb_thread.o concurrent_monitor.o semaphore.o private_server.o rml_tbb.o tbb_misc.o tbb_misc_ex.o task.o task_group_context.o governor.o market.o arena.o scheduler.o observer_proxy.o tbb_statistics.o tbb_main.o concurrent_vector_v2.o concurrent_queue_v2.o spin_rw_mutex_v2.o task_v2.o   -ldl -lpthread -dynamiclib -install_name @rpath/libtbb.dylib -stdlib=libc++ -m64 -mmacosx-version-min=10.11 -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   -Wl,-exported_symbols_list,tbb.def

--- CmdStan v2.31.0 built ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -MT stan/src/stan/model/model_header.hpp.gch -MT stan/src/stan/model/model_header.d -MM -E -MG -MP -MF stan/src/stan/model/model_header.d stan/src/stan/model/model_header.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -MT src/cmdstan/main.o -MM -E -MG -MP -MF src/cmdstan/main.d src/cmdstan/main.cpp

--- Translating Stan model to C++ code ---
bin/stanc  --o=examples/bernoulli/bernoulli.hpp examples/bernoulli/bernoulli.stan

--- Compiling, linking C++ code ---
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS          -c -include-pch stan/src/stan/model/model_header.hpp.gch -x c++ -o examples/bernoulli/bernoulli.o examples/bernoulli/bernoulli.hpp
clang++ -std=c++1y -Wno-unknown-warning-option -Wno-tautological-compare -Wno-sign-compare -D_REENTRANT -Wno-ignored-attributes      -I stan/lib/stan_math/lib/tbb_2020.3/include    -O3 -I src -I stan/src -I stan/lib/rapidjson_1.1.0/ -I lib/CLI11-1.9.1/ -I stan/lib/stan_math/ -I stan/lib/stan_math/lib/eigen_3.3.9 -I stan/lib/stan_math/lib/boost_1.78.0 -I stan/lib/stan_math/lib/sundials_6.1.1/include -I stan/lib/stan_math/lib/sundials_6.1.1/src/sundials    -DBOOST_DISABLE_ASSERTS                -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"      examples/bernoulli/bernoulli.o src/cmdstan/main.o        -Wl,-L,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb" -Wl,-rpath,"/Users/brianbeckage/.cmdstan/cmdstan-2.31.0/stan/lib/stan_math/lib/tbb"   stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_nvecserial.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_cvodes.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_idas.a stan/lib/stan_math/lib/sundials_6.1.1/lib/libsundials_kinsol.a  stan/lib/stan_math/lib/tbb/libtbb.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc.dylib stan/lib/stan_math/lib/tbb/libtbbmalloc_proxy.dylib -o examples/bernoulli/bernoulli
rm -f examples/bernoulli/bernoulli.o
* Finished installing CmdStan to /Users/brianbeckage/.cmdstan/cmdstan-2.31.0

CmdStan path set to: /Users/brianbeckage/.cmdstan/cmdstan-2.31.0
  1. Installing Rethinking package
install.packages(c("coda","mvtnorm","devtools","loo","dagitty","shape"))
also installing the dependencies ‘askpass’, ‘credentials’, ‘openssl’, ‘sys’, ‘zip’, ‘gitcreds’, ‘ini’, ‘systemfonts’, ‘textshaping’, ‘diffobj’, ‘rematch2’, ‘clipr’, ‘gert’, ‘gh’, ‘purrr’, ‘whisker’, ‘downlit’, ‘httr’, ‘ragg’, ‘xml2’, ‘xopen’, ‘brew’, ‘cpp11’, ‘brio’, ‘praise’, ‘waldo’, ‘usethis’, ‘pkgdown’, ‘pkgload’, ‘profvis’, ‘rcmdcheck’, ‘remotes’, ‘roxygen2’, ‘rversions’, ‘sessioninfo’, ‘testthat’, ‘urlchecker’

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/askpass_1.1.tgz'
Content type 'application/x-gzip' length 21686 bytes (21 KB)
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downloaded 21 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/credentials_1.3.2.tgz'
Content type 'application/x-gzip' length 171290 bytes (167 KB)
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downloaded 167 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/openssl_2.0.5.tgz'
Content type 'application/x-gzip' length 2880572 bytes (2.7 MB)
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downloaded 2.7 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/sys_3.4.1.tgz'
Content type 'application/x-gzip' length 46958 bytes (45 KB)
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downloaded 45 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/zip_2.2.2.tgz'
Content type 'application/x-gzip' length 201007 bytes (196 KB)
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downloaded 196 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/gitcreds_0.1.2.tgz'
Content type 'application/x-gzip' length 93688 bytes (91 KB)
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downloaded 91 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/ini_0.3.1.tgz'
Content type 'application/x-gzip' length 13312 bytes (13 KB)
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downloaded 13 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/systemfonts_1.0.4.tgz'
Content type 'application/x-gzip' length 5879392 bytes (5.6 MB)
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downloaded 5.6 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/textshaping_0.3.6.tgz'
Content type 'application/x-gzip' length 5357296 bytes (5.1 MB)
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downloaded 5.1 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/diffobj_0.3.5.tgz'
Content type 'application/x-gzip' length 1004587 bytes (981 KB)
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downloaded 981 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/rematch2_2.1.2.tgz'
Content type 'application/x-gzip' length 45040 bytes (43 KB)
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downloaded 43 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/clipr_0.8.0.tgz'
Content type 'application/x-gzip' length 51002 bytes (49 KB)
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downloaded 49 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/gert_1.9.2.tgz'
Content type 'application/x-gzip' length 1992374 bytes (1.9 MB)
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downloaded 1.9 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/gh_1.3.1.tgz'
Content type 'application/x-gzip' length 94034 bytes (91 KB)
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downloaded 91 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/purrr_1.0.1.tgz'
Content type 'application/x-gzip' length 510124 bytes (498 KB)
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downloaded 498 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/whisker_0.4.1.tgz'
Content type 'application/x-gzip' length 65688 bytes (64 KB)
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downloaded 64 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/downlit_0.4.2.tgz'
Content type 'application/x-gzip' length 111258 bytes (108 KB)
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downloaded 108 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/httr_1.4.4.tgz'
Content type 'application/x-gzip' length 502987 bytes (491 KB)
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downloaded 491 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/ragg_1.2.5.tgz'
Content type 'application/x-gzip' length 9223895 bytes (8.8 MB)
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downloaded 8.8 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/xml2_1.3.3.tgz'
Content type 'application/x-gzip' length 445926 bytes (435 KB)
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downloaded 435 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/xopen_1.0.0.tgz'
Content type 'application/x-gzip' length 22589 bytes (22 KB)
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downloaded 22 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/brew_1.0-8.tgz'
Content type 'application/x-gzip' length 74970 bytes (73 KB)
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downloaded 73 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/cpp11_0.4.3.tgz'
Content type 'application/x-gzip' length 296464 bytes (289 KB)
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downloaded 289 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/brio_1.1.3.tgz'
Content type 'application/x-gzip' length 40561 bytes (39 KB)
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downloaded 39 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/praise_1.0.0.tgz'
Content type 'application/x-gzip' length 16253 bytes (15 KB)
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downloaded 15 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/waldo_0.4.0.tgz'
Content type 'application/x-gzip' length 100194 bytes (97 KB)
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downloaded 97 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/usethis_2.1.6.tgz'
Content type 'application/x-gzip' length 790136 bytes (771 KB)
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downloaded 771 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/pkgdown_2.0.7.tgz'
Content type 'application/x-gzip' length 732397 bytes (715 KB)
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downloaded 715 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/pkgload_1.3.2.tgz'
Content type 'application/x-gzip' length 176099 bytes (171 KB)
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downloaded 171 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/profvis_0.3.7.tgz'
Content type 'application/x-gzip' length 180682 bytes (176 KB)
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downloaded 176 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/rcmdcheck_1.4.0.tgz'
Content type 'application/x-gzip' length 168962 bytes (165 KB)
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downloaded 165 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/remotes_2.4.2.tgz'
Content type 'application/x-gzip' length 395340 bytes (386 KB)
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downloaded 386 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/roxygen2_7.2.3.tgz'
Content type 'application/x-gzip' length 910190 bytes (888 KB)
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downloaded 888 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/rversions_2.1.2.tgz'
Content type 'application/x-gzip' length 64504 bytes (62 KB)
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downloaded 62 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/sessioninfo_1.2.2.tgz'
Content type 'application/x-gzip' length 184067 bytes (179 KB)
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downloaded 179 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/testthat_3.1.6.tgz'
Content type 'application/x-gzip' length 2988406 bytes (2.8 MB)
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downloaded 2.8 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/urlchecker_1.0.1.tgz'
Content type 'application/x-gzip' length 33298 bytes (32 KB)
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downloaded 32 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/coda_0.19-4.tgz'
Content type 'application/x-gzip' length 321854 bytes (314 KB)
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downloaded 314 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/mvtnorm_1.1-3.tgz'
Content type 'application/x-gzip' length 260575 bytes (254 KB)
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downloaded 254 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/devtools_2.4.5.tgz'
Content type 'application/x-gzip' length 422160 bytes (412 KB)
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downloaded 412 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/loo_2.5.1.tgz'
Content type 'application/x-gzip' length 1589173 bytes (1.5 MB)
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downloaded 1.5 MB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/dagitty_0.3-1.tgz'
Content type 'application/x-gzip' length 297509 bytes (290 KB)
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downloaded 290 KB

trying URL 'https://cran.rstudio.com/bin/macosx/contrib/4.2/shape_1.4.6.tgz'
Content type 'application/x-gzip' length 783757 bytes (765 KB)
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downloaded 765 KB

The downloaded binary packages are in
    /var/folders/98/_dskclzx4ysgs770t3f24qbw0000gn/T//Rtmpi3512p/downloaded_packages
devtools::install_github("rmcelreath/rethinking")
Registered S3 method overwritten by 'htmlwidgets':
  method           from         
  print.htmlwidget tools:rstudio
Downloading GitHub repo rmcelreath/rethinking@HEAD
Skipping 1 packages not available: cmdstanr
── R CMD build ────────────────────────────────────────────────────────────────────────────────────
  
   checking for file ‘/private/var/folders/98/_dskclzx4ysgs770t3f24qbw0000gn/T/Rtmpi3512p/remotes28174ba7190f/rmcelreath-rethinking-783d111/DESCRIPTION’ ...
  
✔  checking for file ‘/private/var/folders/98/_dskclzx4ysgs770t3f24qbw0000gn/T/Rtmpi3512p/remotes28174ba7190f/rmcelreath-rethinking-783d111/DESCRIPTION’

  
─  preparing ‘rethinking’:
  
  
✔  checking DESCRIPTION meta-information

  
─  checking for LF line-endings in source and make files and shell scripts

  
─  checking for empty or unneeded directories
─  looking to see if a ‘data/datalist’ file should be added

  
─  building ‘rethinking_2.21.tar.gz’

  
   
* installing *source* package ‘rethinking’ ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (rethinking)

I can now load the rethinking library.

library(rethinking)

This is an R Markdown Notebook. When you execute code within the notebook, the results appear beneath the code.

Try executing this chunk by clicking the Run button within the chunk or by placing your cursor inside it and pressing Cmd+Shift+Enter.

plot(cars)

Add a new chunk by clicking the Insert Chunk button on the toolbar or by pressing Cmd+Option+I.

When you save the notebook, an HTML file containing the code and output will be saved alongside it (click the Preview button or press Cmd+Shift+K to preview the HTML file).

The preview shows you a rendered HTML copy of the contents of the editor. Consequently, unlike Knit, Preview does not run any R code chunks. Instead, the output of the chunk when it was last run in the editor is displayed.

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